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Xylanase C from aspergillus kawachii F131W mutant

Analyse Xylanase C from aspergillus kawachii F131W mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3RI9
Type: protein
Length: 182 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Endo-1,4-beta-xylanase 3
EC: 3.2.1.8
UniProt: P33557
Pockets: 1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 63% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Endo-1,4-beta-xylanase 3 (EC 3.2.1.8)	protein	182	10% helix, 63% strand	P33557

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	196	0.51	0.77	25	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

3RI9 · Xylanase C from Aspergillus kawachii F131W mutant · the same entry in another collection · chain A against A, TM-score 1.00
P33557 · AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase 3 (P33557) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P33557
Elsewhere: RCSB PDB 3RI9 · PDBe 3RI9 · UniProt P33557

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