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Crystal structure of the apo form of glutaredoxin C5 from arabidopsis thaliana

Analyse Crystal structure of the apo form of glutaredoxin C5 from arabidopsis thaliana in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3RHB
Type
protein
Length
100 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Glutaredoxin-C5, chloroplastic
UniProt
Q8GWS0
Ligands
GSH, SO4

Structure

x-ray diffraction · 1 distinct chain · 56% helix, 17% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGlutaredoxin-C5, chloroplasticprotein10056% helix, 17% strandQ8GWS0

Ligands and binding sites

  • GSH · Glutathione · ligand · chains A
  • SO4 · Sulfate ion · ion · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 covalent (covalent ligand).

Compared structures

  • 3RHB · Crystal structure of the apo form of glutaredoxin C5 from Arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
  • Q8GWS0 · AlphaFold monomer V2.0 prediction for glutaredoxin-C5, chloroplastic (Q8GWS0) · a predicted model of the same protein · chain A against A, TM-score 0.99

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