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DPO4 extension ternary complex with 3'-terminal primer G base opposite the 1-methylguanine (M1G) lesion

Analyse DPO4 extension ternary complex with 3'-terminal primer G base opposite the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3RB0
Type
protein + DNA
Length
739 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q97W02

Structure

x-ray diffraction · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein341—Q97W02
D—dna12——
E—dna19——
H—dna11——
J—dna15——

Compared structures

  • 3RB0 · Dpo4 extension ternary complex with 3'-terminal primer G base opposite the… · the same entry in another collection · chain J against J, TM-score 1.00
  • Q97W02 · AlphaFold monomer V2.0 prediction for DNA polymerase IV (Q97W02) · a predicted model of the same protein · chain A against A, TM-score 0.97

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