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Crystal structure of thrombospondin-1 tsr domains 2 and 3

Analyse Crystal structure of thrombospondin-1 tsr domains 2 and 3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3R6B
Type: protein
Length: 115 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Thrombospondin-1
UniProt: P07996

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Thrombospondin-1	protein	115	0% helix, 21% strand	P07996

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 8 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

3R6B · Crystal Structure of Thrombospondin-1 TSR Domains 2 and 3 · the same entry in another collection · chain A against A, TM-score 1.00
P07996 · AlphaFold monomer V2.0 prediction for thrombospondin-1 (P07996) · a predicted model of the same protein · chain A against A, TM-score 0.46

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07996
Elsewhere: RCSB PDB 3R6B · PDBe 3R6B · UniProt P07996

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