Research workbench
Crystal structure of the yeast VPS23 uev domain in complex with a VPS27 psdp peptide
Analyse Crystal structure of the yeast VPS23 uev domain in complex with a VPS27 psdp… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3R42
- Type
- protein
- Length
- 164 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Suppressor protein STP22 of temperature-sensitive alpha- factor receptor and arginine…
- UniProt
- P25604, P40343
Structure
x-ray diffraction · 2 distinct chains · 32% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Suppressor protein STP22 of temperature-sensitive alpha- factor receptor and arginine permease | protein | 156 | 33% helix, 22% strand | P25604 |
| B | Vacuolar protein sorting-associated protein 27 | protein | 8 | 0% helix, 13% strand | P40343 |
Interfaces
1 interface between chains.
- A–B · 489 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 3R42 · Crystal structure of the yeast vps23 UEV domain in complex with a vps27 PSDP peptide · the same entry in another collection · chain A against A, TM-score 1.00
- P25604 · AlphaFold monomer V2.0 prediction for suppressor protein STP22 of temperature-sensitive… · a predicted model of the same protein · chain A against A, TM-score 0.98
- P40343 · AlphaFold monomer V2.0 prediction for vacuolar protein sorting- associated protein 27… · a predicted model of the same protein · chain B against A, TM-score 0.49
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25604
- Every structure of UniProt P40343
- Elsewhere: RCSB PDB 3R42 · PDBe 3R42 · UniProt P25604 · UniProt P40343
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