Research workbench
Staphylococcus aureus isda neat domain K75A variant in complex with heme
Analyse Staphylococcus aureus isda neat domain K75A variant in complex with heme in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3QZL
- Type
- protein
- Length
- 121 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Iron-regulated surface determinant protein a
- UniProt
- Q7A655
- Ligands
- HEM
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 9% helix, 60% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Iron-regulated surface determinant protein a | protein | 121 | 9% helix, 60% strand | Q7A655 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.49 | 0.82 | 18 | HEM |
Compared structures
- 3QZL · Staphylococcus aureus IsdA NEAT domain K75A variant in complex with heme · the same entry in another collection · chain A against A, TM-score 1.00
- Q7A655 · AlphaFold monomer V2.0 prediction for iron-regulated surface determinant protein a… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7A655
- Elsewhere: RCSB PDB 3QZL · PDBe 3QZL · UniProt Q7A655
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