Research workbench

Proliferating cell nuclear antigen (PCNA) homolog from pyrococcus furiosus

Analyse Proliferating cell nuclear antigen (PCNA) homolog from pyrococcus furiosus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1GE8
Type: protein
Length: 238 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Proliferation cell nuclear antigen
UniProt: O73947
Pockets: 1 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 18% helix, 49% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Proliferation cell nuclear antigen	protein	238	18% helix, 49% strand	O73947

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.75	0.98	17	empty

Compared structures

1GE8 · Proliferating cell nuclear antigen (PCNA) homolog from pyrococcus furiosus · the same entry in another collection · chain A against A, TM-score 1.00
O73947 · AlphaFold monomer V2.0 prediction for DNA polymerase sliding clamp (O73947) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O73947
Elsewhere: RCSB PDB 1GE8 · PDBe 1GE8 · UniProt O73947

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