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One ramp protein binding different RNA substrates

Analyse One ramp protein binding different RNA substrates in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3QJJ
Type
protein + RNA
Length
507 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O58088

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
R, Q—rna12——
A—protein243—O58088
B—protein240—O58088

Compared structures

  • 3QJJ · One RAMP protein binding different RNA substrates · the same entry in another collection · chain Q against Q, TM-score 1.00
  • O58088 · AlphaFold monomer V2.0 prediction for putative CRISPR-associated endoribonuclease-like… · a predicted model of the same protein · chain B against A, TM-score 0.98

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