Research workbench
Crystal structure of RRA(1-215) from deinococcus radiodurans
Analyse Crystal structure of RRA(1-215) from deinococcus radiodurans in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3Q9S
- Type
- protein
- Length
- 210 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA-binding response regulator
- UniProt
- Q9RRR8
- Pockets
- 4 · best druggability 0.59
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding response regulator | protein | 210 | 43% helix, 18% strand | Q9RRR8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 301 | 0.59 | 0.78 | 32 | empty |
| 2 | 81 | 0.37 | 0.77 | 17 | empty |
| 3 | 96 | 0.36 | 0.74 | 13 | empty |
| 4 | 60 | 0.32 | 0.76 | 13 | empty |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3Q9S · Crystal structure of rra(1-215) from Deinococcus Radiodurans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RRR8
- Elsewhere: RCSB PDB 3Q9S · PDBe 3Q9S · UniProt Q9RRR8
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