Research workbench
Structure of espg protein
Analyse Structure of espg protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3Q1C
- Type
- protein
- Length
- 351 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lee-encoded effector espg
- UniProt
- B7UMC8
- Pockets
- 3 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lee-encoded effector espg | protein | 351 | 34% helix, 25% strand | B7UMC8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 289 | 0.54 | 0.76 | 45 | empty |
| 2 | 98 | 0.40 | 0.77 | 20 | empty |
| 3 | 50 | 0.34 | 0.78 | 9 | empty |
Compared structures
- 3Q1C · Structure of EspG Protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7UMC8
- Elsewhere: RCSB PDB 3Q1C · PDBe 3Q1C · UniProt B7UMC8
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