Research workbench

REP1-nxsq fatty acid transporter

Analyse REP1-nxsq fatty acid transporter in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3PPT
Type: protein
Length: 133 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: REP1-ncxsq
UniProt: C4N147
Ligands: PAM
Pockets: 1 · best druggability 0.84

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 57% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	REP1-ncxsq	protein	133	15% helix, 57% strand	C4N147

Ligands and binding sites

PAM · Palmitoleic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	302	0.84	0.94	34	PAM

Compared structures

3PPT · REP1-NXSQ fatty acid transporter · the same entry in another collection · chain A against A, TM-score 1.00
C4N147 · AlphaFold monomer V2.0 prediction for SODIUM/CALCIUM exchanger regulatory protein 1… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C4N147
Elsewhere: RCSB PDB 3PPT · PDBe 3PPT · UniProt C4N147

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