Research workbench
MAP kinase LMAMPK10 from leishmania major (1.95 angs resolution)
Analyse MAP kinase LMAMPK10 from leishmania major (1.95 angs resolution) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3PG1
- Type
- protein
- Length
- 341 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mitogen-activated protein kinase, putative (MAP kinase-like protein)
- UniProt
- Q4QHJ8
- Pockets
- 4 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mitogen-activated protein kinase, putative (MAP kinase-like protein) | protein | 341 | 45% helix, 14% strand | Q4QHJ8 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 306 | 0.61 | 0.78 | 39 | empty |
| 2 | 141 | 0.50 | 0.79 | 20 | empty |
| 3 | 64 | 0.28 | 0.73 | 19 | empty |
| 4 | 55 | 0.25 | 0.72 | 16 | empty |
Compared structures
- 3PG1 · MAP kinase LmaMPK10 from Leishmania major (1.95 angs resolution) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4QHJ8
- Elsewhere: RCSB PDB 3PG1 · PDBe 3PG1 · UniProt Q4QHJ8
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