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The structure of uncharacterized protein pp-LUZ7_GP033 from pseudomonas phage LUZ7.
Analyse The structure of uncharacterized protein pp-LUZ7_GP033 from pseudomonas phage… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3PF6
- Type
- protein
- Length
- 230 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein pp-LUZ7_GP033
- UniProt
- C8ZKC7
- Ligands
- CL
Structure
x-ray diffraction · 4 distinct chains · 55% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein pp-LUZ7_GP033 | protein | 60 | 53% helix, 0% strand | C8ZKC7 |
| B | Hypothetical protein pp-LUZ7_GP033 | protein | 59 | 54% helix, 0% strand | C8ZKC7 |
| C | Hypothetical protein pp-LUZ7_GP033 | protein | 56 | 55% helix, 0% strand | C8ZKC7 |
| D | Hypothetical protein pp-LUZ7_GP033 | protein | 55 | 56% helix, 0% strand | C8ZKC7 |
Ligands and binding sites
- CL · Chloride ion · ion · 5 copies · chains B, C, A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
6 interfaces between chains.
- A–D · 2458 Ų buried · 29 hydrogen bonds · protein-protein
- B–C · 2423 Ų buried · 29 hydrogen bonds · protein-protein
- B–D · 219 Ų buried · 1 hydrogen bond · protein-protein
- A–B · 206 Ų buried · 3 hydrogen bonds · protein-protein
- C–D · 100 Ų buried · 2 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 14 modified (engineered).
Compared structures
- 3PF6 · The structure of uncharacterized protein PP-LUZ7_gp033 from Pseudomonas phage LUZ7. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C8ZKC7
- Elsewhere: RCSB PDB 3PF6 · PDBe 3PF6 · UniProt C8ZKC7
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