Research workbench
Crystal structure of TTHA0988 in space group P6522
Analyse Crystal structure of TTHA0988 in space group P6522 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3ORE
- Type
- protein
- Length
- 744 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein TTHA0988
- UniProt
- Q5SJM0
- Pockets
- 8 · best druggability 0.71
Structure
x-ray diffraction · 2 distinct chains · 12% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein TTHA0988 | protein | 481 | 14% helix, 36% strand | Q5SJM0 |
| B | Putative uncharacterized protein TTHA0988 | protein | 263 | 10% helix, 36% strand | Q5SJM0 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 358 | 0.71 | 0.83 | 46 | empty |
| 2 | 64 | 0.64 | 0.93 | 17 | empty |
| 3 | 377 | 0.60 | 0.76 | 36 | empty |
| 4 | 222 | 0.51 | 0.75 | 25 | empty |
| 5 | 93 | 0.46 | 0.80 | 25 | empty |
Interfaces
1 interface between chains.
- A–B · 239 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 3ORE · Crystal structure of TTHA0988 in space group P6522 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SJM0
- Elsewhere: RCSB PDB 3ORE · PDBe 3ORE · UniProt Q5SJM0
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