Research workbench
Structured domain of drosophila melanogaster boca P65 2 2 crystal form
Analyse Structured domain of drosophila melanogaster boca P65 2 2 crystal form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3OFF
- Type
- protein
- Length
- 85 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ldlr chaperone boca
- UniProt
- Q8T9B6
- Ligands
- NA, SO4
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ldlr chaperone boca | protein | 85 | 33% helix, 35% strand | Q8T9B6 |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
- SO4 · Sulfate ion · ion · 3 copies · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 3OFF · Structured Domain of Drosophila melanogaster Boca p65 2 2 Crystal form · the same entry in another collection · chain A against A, TM-score 1.00
- Q8T9B6 · AlphaFold monomer V2.0 prediction for ldlr chaperone boca (Q8T9B6) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8T9B6
- Elsewhere: RCSB PDB 3OFF · PDBe 3OFF · UniProt Q8T9B6
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