Research workbench
Crystal structure of a pfam DUF1093 family protein (BSU39620) from bacillus subtilis at 2.15 a resolution
Analyse Crystal structure of a pfam DUF1093 family protein (BSU39620) from bacillus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3NPP
- Type
- protein
- Length
- 174 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pfam DUF1093 family protein
- UniProt
- P54940
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Pfam DUF1093 family protein | protein | 87 | 11% helix, 52% strand | P54940 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1046 Ų buried · 17 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 3NPP · Crystal structure of a Pfam DUF1093 family protein (BSU39620) from Bacillus subtilis at… · the same entry in another collection · chain A against A, TM-score 1.00
- P54940 · AlphaFold monomer V2.0 prediction for uncharacterized protein yxea (P54940) · a predicted model of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54940
- Elsewhere: RCSB PDB 3NPP · PDBe 3NPP · UniProt P54940
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