Research workbench

Crystal structure of the tpr domain of kinesin light chain 1

Analyse Crystal structure of the tpr domain of kinesin light chain 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3NF1
Type: protein
Length: 283 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Kinesin light chain 1
UniProt: Q07866
Pockets: 4 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 78% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Kinesin light chain 1	protein	283	78% helix, 0% strand	Q07866

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	281	0.54	0.76	41	empty
2	73	0.37	0.77	15	empty
3	70	0.35	0.77	15	empty
4	57	0.32	0.76	14	empty

Compared structures

3NF1 · Crystal structure of the TPR domain of kinesin light chain 1 · the same entry in another collection · chain A against A, TM-score 1.00
Q07866 · AlphaFold monomer V2.0 prediction for kinesin light chain 1 (Q07866) · a predicted model of the same protein · chain A against A, TM-score 0.81

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q07866
Elsewhere: RCSB PDB 3NF1 · PDBe 3NF1 · UniProt Q07866

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.