Research workbench
Crystal structure of ehec O157:H7 intimin mutant
Analyse Crystal structure of ehec O157:H7 intimin mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3NCX
- Type
- protein
- Length
- 371 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Intimin adherence protein
- UniProt
- C6UYL6
- Pockets
- 2 · best druggability 0.67
Structure
x-ray diffraction · 2 distinct chains · 15% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Intimin adherence protein | protein | 188 | 16% helix, 36% strand | C6UYL6 |
| B | Intimin adherence protein | protein | 183 | 13% helix, 38% strand | C6UYL6 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 568 | 0.67 | 0.77 | 59 | empty |
| 2 | 221 | 0.61 | 0.81 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 595 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 3NCX · Crystal structure of EHEC O157:H7 intimin mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6UYL6
- Elsewhere: RCSB PDB 3NCX · PDBe 3NCX · UniProt C6UYL6
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