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NMR solution structure of the DNA dodecamer ggcaagaaacgg

Analyse NMR solution structure of the DNA dodecamer ggcaagaaacgg in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1G14
Type: DNA
Length: 24 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-D(*GP*GP*CP*AP*AP*GP*AP*AP*AP*CP*GP*G)-3'; 5'-D(*CP*CP*GP*TP*TP*TP*CP*TP*TP*GP*CP*C)-3'

Structure

solution nmr · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	5'-D(GPGPCPAPAPGPAPAPAPCPGPG)-3'	dna	12	—	—
B	5'-D(CPCPGPTPTPTPCPTPTPGPCPC)-3'	dna	12	—	—

Interfaces

1 interface between chains.

A–B · 534 Å² buried · 71 hydrogen bonds · nucleic-nucleic

Compared structures

1G14 · NMR solution structure of the DNA dodecamer ggcaagaaacgg · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1G14 · PDBe 1G14

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