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CEKDM7A from C.ELEGANS, complex with H3K4ME3 peptide and nog

Analyse CEKDM7A from C.ELEGANS, complex with H3K4ME3 peptide and nog in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3N9L
Type
protein
Length
492 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9GYI0, P08898

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein486—Q9GYI0
B—protein6—P08898

Compared structures

  • 3N9L · ceKDM7A from C.elegans, complex with H3K4me3 peptide and NOG · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9GYI0 · AlphaFold monomer V2.0 prediction for lysine-specific demethylase 7 homolog (Q9GYI0) · a predicted model of the same protein · chain A against A, TM-score 0.97
  • P08898 · AlphaFold monomer V2.0 prediction for histone H3 (P08898) · a predicted model of the same protein · chain B against A, TM-score 0.46

Analyse

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