Research workbench
Crystal structure of the ligand binding domain of lir-1 (ILT2)
Analyse Crystal structure of the ligand binding domain of lir-1 (ILT2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1G0X
- Type
- protein
- Length
- 192 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Leucocyte immunoglobulin-like receptor-1
- UniProt
- Q8NHL6
- Pockets
- 1 · best druggability 0.33
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucocyte immunoglobulin-like receptor-1 | protein | 192 | 7% helix, 45% strand | Q8NHL6 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.33 | 0.74 | 23 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 1G0X · Crystal structure of the ligand binding domain of lir-1 (ILT2) · the same entry in another collection · chain A against A, TM-score 1.00
- Q8NHL6 · AlphaFold monomer V2.0 prediction for leukocyte immunoglobulin-like receptor subfamily B… · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NHL6
- Elsewhere: RCSB PDB 1G0X · PDBe 1G0X · UniProt Q8NHL6
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