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Crystal structure of bovine retinal creatine kinase

Analyse Crystal structure of bovine retinal creatine kinase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1G0W
Type: protein
Length: 372 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Creatine kinase
EC: 2.7.3.2
UniProt: Q9XSC6
Ligands: SO4
Pockets: 3 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Creatine kinase (EC 2.7.3.2)	protein	372	38% helix, 16% strand	Q9XSC6

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	210	0.53	0.78	31	SO4
2	81	0.31	0.73	17	SO4
3	63	0.25	0.72	14	empty

Compared structures

1G0W · Crystal structure of bovine retinal creatine kinase · the same entry in another collection · chain A against A, TM-score 1.00
Q9XSC6 · AlphaFold monomer V2.0 prediction for creatine kinase M-type (Q9XSC6) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9XSC6
Elsewhere: RCSB PDB 1G0W · PDBe 1G0W · UniProt Q9XSC6

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