Research workbench
Effector binding domain of tsar in complex with its inducer P- toluenesulfonate
Analyse Effector binding domain of tsar in complex with its inducer P- toluenesulfonate in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3N6U
- Type
- protein
- Length
- 205 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lysr type regulator of tsambcd
- UniProt
- P94678
- Ligands
- TSU, SO4
- Pockets
- 1 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysr type regulator of tsambcd | protein | 205 | 32% helix, 28% strand | P94678 |
Ligands and binding sites
- TSU · Para-toluene sulfonate · ligand · 3 copies · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
- ACT · Acetate ion · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 153 | 0.67 | 0.87 | 33 | TSU |
Compared structures
- 3N6U · Effector binding domain of TsaR in complex with its inducer p-toluenesulfonate · the same entry in another collection · chain A against A, TM-score 1.00
- P94678 · AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator tsar (P94678) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P94678
- Elsewhere: RCSB PDB 3N6U · PDBe 3N6U · UniProt P94678
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