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Crystal structure of quintuple arg-to-lys variant of T. celer L30E

Analyse Crystal structure of quintuple arg-to-lys variant of T. celer L30E in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3N4Z
Type: protein
Length: 193 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 50S ribosomal protein L30E
UniProt: P29160
Pockets: 1 · best druggability 0.59

Structure

x-ray diffraction · 2 distinct chains · 47% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L30E	protein	97	46% helix, 20% strand	P29160
B	50S ribosomal protein L30E	protein	96	47% helix, 20% strand	P29160

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	280	0.59	0.78	29	empty

Interfaces

1 interface between chains.

A–B · 302 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

3N4Z · Crystal structure of quintuple Arg-to-Lys variant of T. celer L30e · the same entry in another collection · chain A against A, TM-score 1.00
P29160 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L30E (P29160) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P29160
Elsewhere: RCSB PDB 3N4Z · PDBe 3N4Z · UniProt P29160

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