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2.2 ångström resolution crystal structure of nuclease domain of ribonuclase III (rnc) from campylobacter jejuni

Analyse 2.2 ångström resolution crystal structure of nuclease domain of ribonuclase III… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3N3W
Type: protein
Length: 291 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ribonuclease III
EC: 3.1.26.3
UniProt: D3FPA5
Pockets: 2 · best druggability 0.29

Structure

x-ray diffraction · 2 distinct chains · 69% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribonuclease III (EC 3.1.26.3)	protein	144	70% helix, 3% strand	D3FPA5
B	Ribonuclease III (EC 3.1.26.3)	protein	147	68% helix, 3% strand	D3FPA5

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	75	0.29	0.72	15	empty
2	70	0.28	0.72	14	empty

Interfaces

1 interface between chains.

A–B · 1078 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

3N3W · 2.2 Angstrom Resolution Crystal Structure of Nuclease Domain of Ribonuclase III (rnc)… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D3FPA5
Elsewhere: RCSB PDB 3N3W · PDBe 3N3W · UniProt D3FPA5

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