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Crystal structure of lptc

Analyse Crystal structure of lptc in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3MY2
Type: protein
Length: 126 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lipopolysaccharide export system protein lptc
UniProt: P0ADV9
Pockets: 1 · best druggability 0.32

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 67% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lipopolysaccharide export system protein lptc	protein	126	0% helix, 67% strand	P0ADV9

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	71	0.32	0.74	16	empty

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

3MY2 · Crystal structure of LptC · the same entry in another collection · chain A against A, TM-score 1.00
P0ADV9 · AlphaFold monomer V2.0 prediction for lipopolysaccharide export system protein lptc… · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0ADV9
Elsewhere: RCSB PDB 3MY2 · PDBe 3MY2 · UniProt P0ADV9

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