Research workbench
Crystal structure of the lymphocytic choriomeningitis virus membrane fusion glycoprotein GP2 in its postfusion conformation
Analyse Crystal structure of the lymphocytic choriomeningitis virus membrane fusion… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3MKO
- Type
- protein
- Length
- 103 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glycoprotein C
- UniProt
- Q9ICW1
- Ligands
- IUM, CL
Structure
x-ray diffraction · 1 distinct chain · 67% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycoprotein C | protein | 103 | 67% helix, 2% strand | Q9ICW1 |
Ligands and binding sites
- IUM · Uranyl (VI) ion · ligand · chains A
- CL · Chloride ion · ion · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3MKO · Crystal Structure of the Lymphocytic Choriomeningitis Virus Membrane Fusion Glycoprotein… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ICW1
- Elsewhere: RCSB PDB 3MKO · PDBe 3MKO · UniProt Q9ICW1
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