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Crystal structure of NADH dehydrogenase subunit C (TFU_2693) from thermobifida fusca yx-ER1 at 2.65 a resolution

Analyse Crystal structure of NADH dehydrogenase subunit C (TFU_2693) from thermobifida… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3MCR
Type: protein
Length: 154 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NADH dehydrogenase, subunit C
UniProt: Q47LE6
Ligands: CO
Pockets: 1 · best druggability 0.30

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NADH dehydrogenase, subunit C	protein	154	32% helix, 30% strand	Q47LE6

Ligands and binding sites

CO · Cobalt (II) ion · metal · chains A
HEZ · Hexane-1,6-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	58	0.30	0.75	13	empty

Compared structures

3MCR · Crystal structure of NADH dehydrogenase subunit C (Tfu_2693) from THERMOBIFIDA FUSCA… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q47LE6
Elsewhere: RCSB PDB 3MCR · PDBe 3MCR · UniProt Q47LE6

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