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Thyroid hormone beta DNA binding domain homodimer with inverted palindrome tre

Analyse Thyroid hormone beta DNA binding domain homodimer with inverted palindrome tre in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3M9E
Type
protein + DNA
Length
487 residues
Chains
8
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P18113

Structure

x-ray diffraction · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein101—P18113
B—protein99—P18113
C, D, G, H—dna22——
E—protein102—P18113
F—protein97—P18113

Compared structures

  • 3M9E · Thyroid hormone beta DNA binding domain homodimer with inverted palindrome TRE · the same entry in another collection · chain G against G, TM-score 1.00
  • P18113 · AlphaFold monomer V2.0 prediction for thyroid hormone receptor beta (P18113) · a predicted model of the same protein · chain E against A, TM-score 0.98

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