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Crystal structure of hud and au-rich element of the C-fos RNA

Analyse Crystal structure of hud and au-rich element of the C-fos RNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1FXL
Type: protein + RNA
Length: 175 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-R(P*UP*UP*UP*UP*AP*UP*UP*UP*U)-3'; Paraneoplastic encephalomyelitis antigen hud
UniProt: P26378

Structure

x-ray diffraction · 2 distinct chains · 27% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	5'-R(PUPUPUPUPAPUPUPUP*U)-3'	rna	8	—	—
A	Paraneoplastic encephalomyelitis antigen hud	protein	167	27% helix, 34% strand	P26378

Interfaces

1 interface between chains.

B–A · 1228 Å² buried · 36 hydrogen bonds · protein-nucleic

Compared structures

1FXL · Crystal structure of hud and au-rich element of the C-fos RNA · the same entry in another collection · chain B against B, TM-score 1.00
P26378 · AlphaFold monomer V2.0 prediction for elav-like protein 4 (P26378) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26378
Elsewhere: RCSB PDB 1FXL · PDBe 1FXL · UniProt P26378

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