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Structure of E. COLI adic

Analyse Structure of E. COLI adic in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3LRB
Type: protein
Length: 820 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ARGININE/AGMATINE antiporter
UniProt: P60063
Pockets: 15 · best druggability 0.83

Structure

x-ray diffraction · 1 distinct chain · 60% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	ARGININE/AGMATINE antiporter	protein	410	60% helix, 0% strand	P60063

Pockets

15 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	240	0.83	0.95	30	empty
2	241	0.83	0.95	31	empty
3	78	0.77	0.99	18	empty
4	98	0.68	0.92	27	empty
5	93	0.66	0.91	23	empty

Interfaces

1 interface between chains.

A–B · 2214 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

3LRB · Structure of E. coli AdiC · the same entry in another collection · chain A against A, TM-score 1.00
P60063 · AlphaFold monomer V2.0 prediction for ARGININE/AGMATINE antiporter (P60063) · a predicted model of the same protein · chain B against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P60063
Elsewhere: RCSB PDB 3LRB · PDBe 3LRB · UniProt P60063

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