Research workbench
Crystal structure of beta 2 microglobulin amyloidogenic segment lsfskd
Analyse Crystal structure of beta 2 microglobulin amyloidogenic segment lsfskd in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3LOZ
- Type
- protein
- Length
- 24 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-2-microglobulin segment lsfskd
- UniProt
- P61769
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | Beta-2-microglobulin segment lsfskd | protein | 6 | 0% helix, 50% strand | P61769 |
Interfaces
5 interfaces between chains.
- A–B · 230 Ų buried · 9 hydrogen bonds · protein-protein
- C–D · 229 Ų buried · 9 hydrogen bonds · protein-protein
- B–D · 157 Ų buried · 0 hydrogen bonds · protein-protein
- B–C · 76 Ų buried · 0 hydrogen bonds · protein-protein
- A–D · 57 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 3LOZ · Crystal structure of Beta 2 Microglobulin amyloidogenic segment LSFSKD · the same entry in another collection · chain D against D, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain C against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61769
- Elsewhere: RCSB PDB 3LOZ · PDBe 3LOZ · UniProt P61769
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