Research workbench
Crystal structure of the anopheles gambiae odorant-binding protein 22A
Analyse Crystal structure of the anopheles gambiae odorant-binding protein 22A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3L47
- Type
- protein
- Length
- 109 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Odorant binding protein (AGAP010409-pa)
- UniProt
- Q7PGA3
- Ligands
- AU
- Pockets
- 2 · best druggability 0.59
Structure
x-ray diffraction · 1 distinct chain · 63% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Odorant binding protein (AGAP010409-pa) | protein | 109 | 63% helix, 4% strand | Q7PGA3 |
Ligands and binding sites
- AU · Gold ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 199 | 0.59 | 0.80 | 21 | empty |
| 2 | 79 | 0.34 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 3L47 · Crystal Structure of the Anopheles gambiae Odorant-binding Protein 22a · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7PGA3
- Elsewhere: RCSB PDB 3L47 · PDBe 3L47 · UniProt Q7PGA3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.