Research workbench
Crystal structure of the lipoprotein localization factor, lola
Analyse Crystal structure of the lipoprotein localization factor, lola in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3KSN
- Type
- protein
- Length
- 177 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer-membrane lipoprotein carrier protein
- UniProt
- P61316
- Pockets
- 2 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 18% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer-membrane lipoprotein carrier protein | protein | 177 | 18% helix, 50% strand | P61316 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 222 | 0.47 | 0.74 | 30 | empty |
| 2 | 56 | 0.35 | 0.79 | 15 | empty |
Compared structures
- 3KSN · Crystal structure of the lipoprotein localization factor, LolA · the same entry in another collection · chain A against A, TM-score 1.00
- P61316 · AlphaFold monomer V2.0 prediction for outer-membrane lipoprotein carrier protein (P61316) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61316
- Elsewhere: RCSB PDB 3KSN · PDBe 3KSN · UniProt P61316
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