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Crystal structure of maoc-like dehydratase from phytophthora capsici
Analyse Crystal structure of maoc-like dehydratase from phytophthora capsici in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3KH8
- Type
- protein
- Length
- 579 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maoc-like dehydratase
- EC
- 4.2.1.-
- Pockets
- 5 · best druggability 0.76
Structure
x-ray diffraction · 2 distinct chains · 24% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maoc-like dehydratase (EC 4.2.1.-) | protein | 295 | 24% helix, 34% strand | — |
| B | Maoc-like dehydratase (EC 4.2.1.-) | protein | 284 | 24% helix, 35% strand | — |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 725 | 0.76 | 0.81 | 69 | empty |
| 2 | 743 | 0.72 | 0.78 | 75 | empty |
| 3 | 218 | 0.65 | 0.84 | 28 | empty |
| 4 | 171 | 0.58 | 0.82 | 29 | empty |
| 5 | 54 | 0.34 | 0.78 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 1358 Ų buried · 27 hydrogen bonds · protein-protein
Compared structures
- 3KH8 · Crystal structure of MaoC-like dehydratase from Phytophthora Capsici · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3KH8 · PDBe 3KH8
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