Research workbench
Dehydratase domain from curj module of curacin polyketide synthase
Analyse Dehydratase domain from curj module of curacin polyketide synthase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3KG8
- Type
- protein
- Length
- 564 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Curj
- EC
- 4.2.1.61
- UniProt
- Q6DNE3
- Pockets
- 3 · best druggability 0.77
Structure
x-ray diffraction · 2 distinct chains · 20% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Curj (EC 4.2.1.61) | protein | 287 | 21% helix, 42% strand | Q6DNE3 |
| B | Curj (EC 4.2.1.61) | protein | 277 | 19% helix, 43% strand | Q6DNE3 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 220 | 0.77 | 0.90 | 36 | empty |
| 2 | 236 | 0.74 | 0.88 | 35 | empty |
| 3 | 96 | 0.38 | 0.76 | 22 | empty |
Interfaces
1 interface between chains.
- A–B · 797 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 3KG8 · Dehydratase domain from CurJ module of Curacin polyketide synthase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6DNE3
- Elsewhere: RCSB PDB 3KG8 · PDBe 3KG8 · UniProt Q6DNE3
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