Research workbench
Crystal structure of S. pombe STN1-TEN1 complex
Analyse Crystal structure of S. pombe STN1-TEN1 complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3KF6
- Type
- protein
- Length
- 241 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein STN1; Protein TEN1
- UniProt
- Q0E7J7, P0C5Y7
- Pockets
- 3 · best druggability 0.63
Structure
x-ray diffraction · 2 distinct chains · 24% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein STN1 | protein | 136 | 28% helix, 40% strand | Q0E7J7 |
| B | Protein TEN1 | protein | 105 | 18% helix, 43% strand | P0C5Y7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 112 | 0.63 | 0.88 | 21 | empty |
| 2 | 112 | 0.41 | 0.76 | 23 | empty |
| 3 | 61 | 0.28 | 0.73 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 1013 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 3KF6 · Crystal structure of S. pombe Stn1-ten1 complex · the same entry in another collection · chain A against A, TM-score 1.00
- Q0E7J7 · AlphaFold monomer V2.0 prediction for protein STN1 (Q0E7J7) · a predicted model of the same protein · chain A against A, TM-score 0.99
- P0C5Y7 · AlphaFold monomer V2.0 prediction for protein TEN1 (P0C5Y7) · a predicted model of the same protein · chain B against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0E7J7
- Every structure of UniProt P0C5Y7
- Elsewhere: RCSB PDB 3KF6 · PDBe 3KF6 · UniProt Q0E7J7 · UniProt P0C5Y7
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