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Frog M-ferritin with cobalt

Analyse Frog M-ferritin with cobalt in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3KA4
Type: protein
Length: 172 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ferritin, middle subunit
EC: 1.16.3.1
UniProt: P07798
Ligands: CO, MG, CL

Structure

x-ray diffraction · 1 distinct chain · 73% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ferritin, middle subunit (EC 1.16.3.1)	protein	172	73% helix, 0% strand	P07798

Ligands and binding sites

CO · Cobalt (II) ion · metal · 8 copies · chains A
MG · Magnesium ion · metal · 6 copies · chains A
CL · Chloride ion · ion · 8 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

3KA4 · Frog M-ferritin with cobalt · the same entry in another collection · chain A against A, TM-score 1.00
P07798 · AlphaFold monomer V2.0 prediction for ferritin, middle subunit (P07798) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07798
Elsewhere: RCSB PDB 3KA4 · PDBe 3KA4 · UniProt P07798

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