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Structure of crystal form IV of TP0453

Analyse Structure of crystal form IV of TP0453 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3K8I
Type: protein
Length: 247 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 30KLP
UniProt: O67998
Pockets: 1 · best druggability 0.76

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	30KLP	protein	247	28% helix, 32% strand	O67998

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1174	0.76	0.78	64	empty

Compared structures

3K8I · Structure of crystal form IV of TP0453 · the same entry in another collection · chain A against A, TM-score 1.00
O67998 · AlphaFold monomer V2.0 prediction for outer membrane protein TP0453 (O67998) · a predicted model of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O67998
Elsewhere: RCSB PDB 3K8I · PDBe 3K8I · UniProt O67998

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