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Crystal structure of NADH:FAD oxidoreductase (tftc) - apo form

Analyse Crystal structure of NADH:FAD oxidoreductase (tftc) - apo form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3K86
Type: protein
Length: 328 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Chlorophenol-4-monooxygenase component 1
UniProt: O87008
Pockets: 1 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Chlorophenol-4-monooxygenase component 1	protein	164	20% helix, 45% strand	O87008

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	769	0.71	0.77	85	empty

Interfaces

1 interface between chains.

A–B · 2824 Å² buried · 28 hydrogen bonds · protein-protein

Compared structures

3K86 · Crystal structure of NADH:FAD oxidoreductase (TftC) - apo form · the same entry in another collection · chain A against A, TM-score 1.00
O87008 · AlphaFold monomer V2.0 prediction for NADH:FAD oxidoreductase (O87008) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O87008
Elsewhere: RCSB PDB 3K86 · PDBe 3K86 · UniProt O87008

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