Research workbench
Crystal structure of putative transferase PH0793 from pyrococcus horikoshii
Analyse Crystal structure of putative transferase PH0793 from pyrococcus horikoshii in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3K6R
- Type
- protein
- Length
- 262 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative transferase PH0793
- UniProt
- O58523
- Pockets
- 1 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transferase PH0793 | protein | 262 | 33% helix, 32% strand | O58523 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 311 | 0.61 | 0.79 | 41 | empty |
Modifications
Observed in the structure: 7 modified (engineered).
Compared structures
- 3K6R · CRYSTAL STRUCTURE OF putative transferase PH0793 FROM PYROCOCCUS HORIKOSHII · the same entry in another collection · chain A against A, TM-score 1.00
- O58523 · AlphaFold monomer V2.0 prediction for TRNA(PHE) (4-DEMETHYLWYOSINE(37)-C(7))… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58523
- Elsewhere: RCSB PDB 3K6R · PDBe 3K6R · UniProt O58523
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