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Crystal structures of pseudomonas syringae pv. tomato DC3000 quinone oxidoreductase
Analyse Crystal structures of pseudomonas syringae pv. tomato DC3000 quinone… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3JYL
- Type
- protein
- Length
- 325 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Quinone oxidoreductase
- EC
- 1.6.5.5
- UniProt
- Q88B47
- Pockets
- 2 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Quinone oxidoreductase (EC 1.6.5.5) | protein | 325 | 34% helix, 26% strand | Q88B47 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 512 | 0.80 | 0.86 | 70 | empty |
| 2 | 103 | 0.41 | 0.77 | 21 | empty |
Compared structures
- 3JYL · Crystal structures of Pseudomonas syringae pv. Tomato DC3000 qui oxidoreductase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q88B47
- Elsewhere: RCSB PDB 3JYL · PDBe 3JYL · UniProt Q88B47
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