Research workbench
X-ray structure of R[CGCG(5-FLUORO)CG]2
Analyse X-ray structure of R[CGCG(5-FLUORO)CG]2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3JXR
- Type
- RNA
- Length
- 18 nucleotides
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- R[CGCG(5-FLUORO)CG]2
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, K | R[CGCG(5-FLUORO)CG]2 | rna | 6 | — | — |
Interfaces
3 interfaces between chains.
- A–B · 333 Ų buried · 34 hydrogen bonds · nucleic-nucleic
- B–K · 110 Ų buried · 4 hydrogen bonds · nucleic-nucleic
- A–K · 41 Ų buried · 0 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 3 modified (nucleotide modification).
Compared structures
- 3JXR · X-Ray structure of r[CGCG(5-fluoro)CG]2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3JXR · PDBe 3JXR
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