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Crystal structure of endo-beta-1,4-mannanase from the alkaliphilic bacillus sp. N16-5

Analyse Crystal structure of endo-beta-1,4-mannanase from the alkaliphilic bacillus sp.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3JUG
Type: protein
Length: 294 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-mannanase
EC: 3.2.1.78
UniProt: Q5YEX6
Ligands: SO4
Pockets: 1 · best druggability 0.50

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-mannanase (EC 3.2.1.78)	protein	294	39% helix, 18% strand	Q5YEX6

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	179	0.50	0.77	24	empty

Compared structures

3JUG · Crystal structure of endo-beta-1,4-mannanase from the alkaliphilic Bacillus sp. N16-5 · the same entry in another collection · chain A against A, TM-score 1.00

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Every structure of UniProt Q5YEX6
Elsewhere: RCSB PDB 3JUG · PDBe 3JUG · UniProt Q5YEX6

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