Research workbench
Electron cryo-microscopy of a virus-like particle of orange-spotted grouper nervous necrosis virus
Analyse Electron cryo-microscopy of a virus-like particle of orange-spotted grouper… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3JBM
- Type
- protein
- Length
- 526 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Virus-like particle of orange-spotted grouper nervous necrosis virus
Structure
electron microscopy · 2 distinct chains · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Virus-like particle of orange-spotted grouper nervous necrosis virus | protein | 170 | 0% helix, 0% strand | — |
| C | Virus-like particle of orange-spotted grouper nervous necrosis virus | protein | 186 | 0% helix, 0% strand | — |
Interfaces
3 interfaces between chains.
- B–C · 77 Ų buried · 0 hydrogen bonds · protein-protein
- A–C · 37 Ų buried · 0 hydrogen bonds · protein-protein
- A–B · 36 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 3JBM · Electron cryo-microscopy of a virus-like particle of orange-spotted grouper nervous… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3JBM · PDBe 3JBM
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