Research workbench
Structural mechanism of the dynein powerstroke (post-powerstroke state)
Analyse Structural mechanism of the dynein powerstroke (post-powerstroke state) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3J67
- Type
- protein
- Length
- 2,245 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dynein motor domain
- Pockets
- 20 · best druggability 0.85
Structure
electron microscopy · 1 distinct chain · 55% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dynein motor domain | protein | 2245 | 55% helix, 11% strand | — |
Pockets
20 pockets found on a 1 Å grid, 15 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1092 | 0.85 | 0.86 | 133 | empty |
| 2 | 1119 | 0.82 | 0.83 | 100 | empty |
| 3 | 695 | 0.78 | 0.83 | 67 | empty |
| 4 | 962 | 0.76 | 0.79 | 92 | empty |
| 5 | 757 | 0.76 | 0.80 | 67 | empty |
Compared structures
- 3J67 · Structural mechanism of the dynein powerstroke (post-powerstroke state) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3J67 · PDBe 3J67
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