Research workbench
Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of rimm
Analyse Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3J29
- Type
- RNA
- Length
- 1,533 nucleotides
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 16S rRNA
- Pockets
- 20 · best druggability 0.82
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| N | 16S rRNA | rna | 1533 | — | — |
Pockets
20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 933 | 0.82 | 0.84 | 63 | empty |
| 2 | 980 | 0.79 | 0.82 | 50 | empty |
| 3 | 873 | 0.74 | 0.79 | 49 | empty |
| 4 | 1035 | 0.69 | 0.75 | 69 | empty |
| 5 | 939 | 0.68 | 0.75 | 47 | empty |
Compared structures
- 3J29 · Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM · the same entry in another collection · chain N against N, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3J29 · PDBe 3J29
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