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Crystal structure of putative glyoxalase superfamily protein (YP_299723.1) from ralstonia eutropha JMP134 at 1.90 a resolution

Analyse Crystal structure of putative glyoxalase superfamily protein (YP_299723.1) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3IUZ
Type: protein
Length: 320 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative glyoxalase superfamily protein
UniProt: Q46PQ5
Pockets: 1 · best druggability 0.59

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative glyoxalase superfamily protein	protein	320	41% helix, 24% strand	Q46PQ5

Ligands and binding sites

PGE · Triethylene glycol · additive · 5 copies · chains A
P6G · Hexaethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	256	0.59	0.79	28	empty

Modifications

Observed in the structure: 11 modified (methylation, engineered).

Compared structures

3IUZ · Crystal structure of Putative glyoxalase superfamily protein (YP_299723.1) from RALSTONIA… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q46PQ5
Elsewhere: RCSB PDB 3IUZ · PDBe 3IUZ · UniProt Q46PQ5

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