Research workbench
Structure of ATU2422-GABA receptor in complex with alanine
Analyse Structure of ATU2422-GABA receptor in complex with alanine in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3IP5
- Type
- protein
- Length
- 348 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ABC transporter, substrate binding protein (amino acid)
- UniProt
- Q7CX36
- Ligands
- ALA
- Pockets
- 3 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ABC transporter, substrate binding protein (amino acid) | protein | 348 | 46% helix, 19% strand | Q7CX36 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.53 | 0.89 | 20 | empty |
| 2 | 85 | 0.50 | 0.83 | 25 | ALA |
| 3 | 75 | 0.33 | 0.75 | 13 | empty |
Compared structures
- 3IP5 · Structure of Atu2422-GABA receptor in complex with alanine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7CX36
- Elsewhere: RCSB PDB 3IP5 · PDBe 3IP5 · UniProt Q7CX36
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