Research workbench
Crystal structure of the second part of the mycobacterium tuberculosis DNA gyrase reaction core: the toprim domain at 2.1 a resolution
Analyse Crystal structure of the second part of the mycobacterium tuberculosis DNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3IG0
- Type
- protein
- Length
- 185 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA gyrase subunit B
- EC
- 5.99.1.3
- UniProt
- P0C5C5
- Pockets
- 2 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA gyrase subunit B (EC 5.99.1.3) | protein | 185 | 45% helix, 19% strand | P0C5C5 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.51 | 0.79 | 35 | empty |
| 2 | 70 | 0.30 | 0.73 | 16 | empty |
Compared structures
- 3IG0 · crystal structure of the second part of the Mycobacterium tuberculosis DNA gyrase… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C5C5
- Elsewhere: RCSB PDB 3IG0 · PDBe 3IG0 · UniProt P0C5C5
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